Nov. 22
BiocManager from CRANBiocManager::install("package_name")devtoolsdevtools::install_github("username/repository").source.tar.gz in your working directory…install.package("source.tar.gz", repos = NULL, type = "source").limma is the favorite package of anyone that wants to analyze gene expression data (microarray, RNA-seq, NanoString etc.)
Install it with the command:
BiocManager::install("limma")
library(limma)?`limma-package`
vignette("intro", package = "limma")The course’s material is in fact an R package. Install it from GitHub with the command:
devtools::install_github("vguillemot/ReMUSE")